cBioPortal for Cancer Genomics | GSoC Organizations

GSoC Organizations

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First-time organizations (16)

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2026 2025 2024 2023 2022 2019 2017 2016

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databasefrontendjavajavascriptmysqlreacttypescript

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big databioinformaticsbiologycancerdatagenomicshealthprecision medicinescience

Past Projects

2026 2025 2024 2023 2022 2019 2017 2016

Automated Clinical Metadata Harmonization Dashboard

Ahmed_Osama

cBioPortal hosts 400+ cancer genomics studies whose clinical metadata is wildly heterogeneous — treatment fields alone have 24+ variants. The...

AI-Assisted Curation Assistant Tool for cBioPortal

fppcng

This project aims to extend the existing cBioAbstractor prototype into a schema-driven formatting pipeline that assists curators in transforming...

Enhance Similarity Maps (Embeddings) Visualization

Leslie Ejeh

cBioPortal introduced Similarity Maps, a feature that visualizes UMAP/PCA embeddings of cancer samples, allowing researchers to discover hidden...

MCP Apps: Interactive Genomic Visualisations for AI Clients

Luke Devlin

This proposal outlines a plan to extend the cBioPortal MCP server with interactive genomic visualisation applications via MCP Apps that allow AI...

Enhance 3D Protein Structure Viewer in cBioPortal using AlphaFold Data

YichuanZ

This project enhances the 3D protein structure viewer in cBioPortal by integrating AlphaFold predicted structures alongside experimentally determined...

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