Implement RFDiffusion and RFDiffusion All-Atom in DeepChem
chidwipak
RFDiffusion (Watson et al., Nature 2023) is the state-of-the-art protein backbone diffusion model but DeepChem currently has no protein structure...
OLMo Support For 7B models In DeepChem
Prisha Priyadarshini
According to the Google Summer of Code (GSoC) project ideas listed for One proposed DeepChem project involves adding support for the OLMo Large...
Machine Learning Interatomic Potentials (MLIP) in DeepChem using E(3)-Equivariant Neural Networks
Satvik Mittal
This project aims to develop a native PyTorch-based Machine Learning Interatomic Potential (MLIP) framework within DeepChem, enabling efficient...
DeepChem-Compatible RFDiffusion Implementation
Shubham Bari
This project aims to implement state-of-the-art protein design models, RFDiffusion and RFDiffusion-2, within the DeepChem framework using a clean,...
Single Cell and DNA Foundation Models
Shubhang Sinha
DeepChem supports transformer-based foundation models for chemistry (ChemBERTa, MolFormer) but has no equivalent for genomic data. This project fills...
