GSoC Proposal Global Alliance for Genomics and Health [ Shubhrajyoti Dey ]
Shubhrajyoti Dey
This proposal aims on solving a problem to create user customisable forms on pedigree data of patients and storing it as per the GA4GH Standards to...
Compliance testing framework for the Task Execution Service API
Lakshya Garg
Task Execution Service (TES) is a Global Alliance for Genomics and Health (GA4GH) standard that allows federating and distributing computing tasks...
Multi-model approach for discovery of associations between gene variants and diseases.
Sindhu Kandepu
To identify possible relations between gene variants, phenotypes, and diseases - an ideal way would be a multi-model approach that involves: •...
BioSerDe: (De)Serializing bioinformatics file formats to alternative representations
Gabriel Simonetto
The field of bioinformatics has used many different extensions to express genomics data throughout its history, most of them focusing on simplicity...
Increasing Support for Molecular Consequence Data in Genomic Standards
Justin Aronson
Molecular consequences of genetic variants determine their impact. For example, the variant NM_001330311.2(DVL1):c.1594del is a frameshift variant...
TES Callback endpoint and mechanism in TESK
Suyash Gupta
The goal of this project is to implement a callback mechanism for task status updates in TES, which will send requests from the server to the client...
Federating workflow execution using GA4GH Cloud APIs
Ayush Kumar
The Task Execution Service (TES) API and the Workflow Execution Service (WES) are two of the several standards defined by the Global Alliance for...
Dynamic computation of variant annotations using GA4GH Variant Annotations plus FHIR Genomics
Rohan Gupta
This project aims to demonstrate sharing of annotated genomic variants between clinicians and knowledge bases using a clinical decision support (CDS)...
