Currently, the Newt editor supports Systems Biological Graphical Notation (SBGN) and Simple Interactive Format (SIF) formats while also allowing...
Create a Pipeline from data extraction to execution of GNN based Drug Response Prediction
Yoshitaka Inoue
The use of machine learning models in medicine is expanding, but there are still undergoing due to the interpretability. One useful example which has...
High-throughput simulation for computational cell biology with Cloud-COPASI
Fizza Rubab
Customized SSH Authentication Free Implementation of the Cloud-COPASI for UConn users: The project proposal aims to create a customized version of...
Updates to the Enrichment Table App
Akash Mondal
This proposal aims to implement new features to the Enrichment Table App. The major changes were adding Ring Charts, prediction of gene id column and...
Adding visualization of protein-complex interaction to OpenPIP
Aniket Ranjan
OpenPIP (Open Source Protein Interaction Platform) is an open-source software package for hosting protein-protein interaction (PPI) data based on the...
Conversion between GenBank and SBOL3
Mohit Makwana
The SBOL-Utilities repository is a python library that provides many useful methods and utilities on top of the main PySBOL3 implementation of SBOL3....
NetBoxR Updates
Sara J
netboxr is an R package for the automated discovery of biological process modules by network analysis. The project involves updating netboxr...
The Computational Modeling in Biology Network (COMBINE) is an initiative to coordinate the development of various community standards and formats in...
